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mas5 microarray suite 5  (Thermo Fisher)


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    Thermo Fisher mas5 microarray suite 5
    Mas5 Microarray Suite 5, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/mas5 microarray suite 5/product/Thermo Fisher
    Average 90 stars, based on 1 article reviews
    mas5 microarray suite 5 - by Bioz Stars, 2026-03
    90/100 stars

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    Overlay of expression detection between MPSS and microarray for sense and antisense transcripts malignant and normal breast epithelium . Human transcriptome clusters (HTR) were used to measure the concordance in detecting sense and antisense transcripts for the Breast Cancer DSA (green), Affymetrix HG U133 Plus 2.0 (blue) and MPSS (red) in both the malignant breast epithelium and normal luminal epithelium. The presence of a MPPS tag was determined if a MPSS tag had at least a count of 3 tpm in these samples. For the two microarray platforms, a HTR cluster was called present when its containing sense (top section) or antisense (bottom section) probe set obtained a present calls with the MAS5 algorithm.

    Journal: BMC Genomics

    Article Title: Identification of differentially expressed sense and antisense transcript pairs in breast epithelial tissues

    doi: 10.1186/1471-2164-10-324

    Figure Lengend Snippet: Overlay of expression detection between MPSS and microarray for sense and antisense transcripts malignant and normal breast epithelium . Human transcriptome clusters (HTR) were used to measure the concordance in detecting sense and antisense transcripts for the Breast Cancer DSA (green), Affymetrix HG U133 Plus 2.0 (blue) and MPSS (red) in both the malignant breast epithelium and normal luminal epithelium. The presence of a MPPS tag was determined if a MPSS tag had at least a count of 3 tpm in these samples. For the two microarray platforms, a HTR cluster was called present when its containing sense (top section) or antisense (bottom section) probe set obtained a present calls with the MAS5 algorithm.

    Article Snippet: Secondly, analysis was performed on the Breast Cancer DSA with the Affymetrix Microarray Suite version 5 (MAS5) algorithms, which uses the probe-pair data to calculate the detection call.

    Techniques: Expressing, Microarray